Stem-loop dps-mir-2573

Accession

MI0011722

Description

Drosophila pseudoobscura dps-mir-2573 precursor miRNA

Sequence

agaguuccgcgcgcucucCGGAGCCGUUAUGAGAGAAGAuuuccgaUCUCAUCCCAUAACGGAGUCCCGAagccaacuca
.(((((....(.(((.((.(((.((((((((.((..(((((...)))))..)).))))))))..))).))))))))))).

Structure

a     ccgc c   c  C   -G        A  GA     u 
 gaguu    g gcu uc GGA  CCGUUAUG GA  AGAuu  
 |||||    | ||| || |||  |||||||| ||  ||||| c
 cucaa    c cga AG CCU  GGCAAUAC CU  UCUag  
a     ---- -   -  C   GA        C  AC     c 

Annotation confidence Not enough data

Genome context

Unknown_group_277: 16532-16611 [+]

Mature dps-miR-2573-5p

• Accession: MIMAT0012416
• Description: Drosophila pseudoobscura dps-miR-2573-5p mature miRNA
• Sequence: 19 - CGGAGCCGUUAUGAGAGAAGA - 39
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2573-3p

• Accession: MIMAT0012417
• Description: Drosophila pseudoobscura dps-miR-2573-3p mature miRNA
• Sequence: 47 - UCUCAUCCCAUAACGGAGUCCCGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9