Stem-loop dsi-mir-6-2

Accession

MI0009473

Description

Drosophila simulans dsi-mir-6-2 precursor miRNA

Sequence

uaaccccAGGGAACUUCUGCUGCUGAUAUAuuauugaaaaacuccuaUAUCACAGUGGCUGUUCUUUUUgguug
(((((..(((((((..((((((.(((((((...............)))))))))))))..)))))))..)))))

Structure

     cc       UU      C       uuauug 
uaacc  AGGGAAC  CUGCUG UGAUAUA      a
|||||  |||||||  |||||| |||||||      a
guugg  UUUCUUG  GGUGAC ACUAUau      a
     UU       UC      -       ccucaa 

Annotation confidence Not enough data

Genome context

chr2R: 14253809-14253882 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-6-2

Mature dsi-miR-6-3p

• Accession: MIMAT0008885
• Description: Drosophila simulans dsi-miR-6-3p mature miRNA
• Sequence: 48 - UAUCACAGUGGCUGUUCUUUUU - 69
• Evidence: experimental ; Illumina [2]

Mature dsi-miR-6-5p

• Accession: MIMAT0015283
• Description: Drosophila simulans dsi-miR-6-5p mature miRNA
• Sequence: 8 - AGGGAACUUCUGCUGCUGAUAUA - 30
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218