miRBase entry: dps-mir-2571

Stem-loop dps-mir-2571


Accession
MI0011720
Description
Drosophila pseudoobscura dps-mir-2571 precursor miRNA


Sequence

auGUGAGUGGUGAUGAUGAUCAAUAUUgggauaugcuuuucugacuaaUAGGUUAUCUGACUUAUCUCACAU
(((((((.(((.(.(((((((..((((((...............)))))))))))))).)))...)))))))

Structure
       --U   G U       AA      gauaug 
auGUGAG   GGU A GAUGAUC  UAUUgg      c
|||||||   ||| | |||||||  ||||||      u
UACACUC   UCA U CUAUUGG  AUaauc      u
       UAU   G -       --      agucuu 


Annotation confidence Not enough data
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Genome context
2: 26718388-26718459 [-]

Database links

Mature dps-miR-2571-5p

Accession MIMAT0012412
Description Drosophila pseudoobscura dps-miR-2571-5p mature miRNA
Sequence 3 - GUGAGUGGUGAUGAUGAUCAAUAUU - 27
Evidence experimental
Illumina [1]

Mature dps-miR-2571-3p

Accession MIMAT0012413
Description Drosophila pseudoobscura dps-miR-2571-3p mature miRNA
Sequence 49 - UAGGUUAUCUGACUUAUCUCACAU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9