Stem-loop dsi-mir-982c

Accession

MI0011782

Description

Drosophila simulans dsi-mir-982c precursor miRNA

Sequence

aguuaaaaaacgaaaucaugcgagaUCUUGGACAAAUAUCAAGUAGAUuauuauuauacaucaauUUAUUGUUAUUUGUCCUUGAACuuaauuguuuuacagcug
((((..(((((((........(((.((..(((((((((.(((.((((((.............))))))))).)))))))))..)).)))..)))))))..)))).

Structure

-    aa       aaucaugc   a  UU         U   G      auuau 
 aguu  aaaacga        gag UC  GGACAAAUA CAA UAGAUu     u
 ||||  |||||||        ||| ||  ||||||||| ||| ||||||     a
 ucga  uuuuguu        uuC AG  CCUGUUUAU GUU AUUuaa     u
g    ca       ------aa   A  UU         U   -      cuaca 

Annotation confidence Not enough data

Genome context

chrX: 3273520-3273624 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-982c

Mature dsi-miR-982c-3p

• Accession: MIMAT0012513
• Description: Drosophila simulans dsi-miR-982c-3p mature miRNA
• Sequence: 66 - UUAUUGUUAUUUGUCCUUGAAC - 87
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-982c-5p

• Accession: MIMAT0037359
• Description: Drosophila simulans dsi-miR-982c-5p mature miRNA
• Sequence: 26 - UCUUGGACAAAUAUCAAGUAGAU - 48
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250