Stem-loop dsi-mir-1010

Accession

MI0011750

Description

Drosophila simulans dsi-mir-1010 precursor miRNA

Gene family

MIPF0000866; mir-1010

Sequence

acacauccguauucgugcucaacggGUAAGUGGUGUAGAUGAAACAaauuuaccaacaauauuuuuguuggauugUUUCACCUAUCGUUCCAUUUGCAGcuacgaggaccuggaacuguu
(((..((((..((((((((......((((((((.((((.((((((((.....(((((((.....))))))).)))))))).))))....))))))))))).)))))....))))..))).

Structure

-   ca    --ua     -   caacgg        ---U    A        auuua       u 
 aca  uccg    uucgu gcu      GUAAGUGG    GUAG UGAAACAa     ccaacaa a
 |||  ||||    ||||| |||      ||||||||    |||| ||||||||     ||||||| u
 ugu  aggu    gagca cGA      CGUUUACC    UAUC ACUUUguu     gguuguu u
u   ca    ccag     u   ------        UUGC    C        ----a       u 

Annotation confidence Not enough data

Genome context

chr3R: 17925959-17926078 [+]

Mature dsi-miR-1010-5p

• Accession: MIMAT0012463
• Description: Drosophila simulans dsi-miR-1010-5p mature miRNA
• Sequence: 26 - GUAAGUGGUGUAGAUGAAACA - 46
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-1010-3p

• Accession: MIMAT0012464
• Description: Drosophila simulans dsi-miR-1010-3p mature miRNA
• Sequence: 76 - UUUCACCUAUCGUUCCAUUUGCAG - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9