Stem-loop dsi-mir-iab-8

Accession

MI0011775

Description

Drosophila simulans dsi-mir-iab-8 precursor miRNA

Gene family

MIPF0000854; mir-iab-8

Sequence

cguugcucgugcuaucucgugUUACGUAUACUGAAGGUAUACCggauaggauacacucAGGAUACAUUCAGUAUACGUUUAcgaggucgcacagaaucgc
((...((.((((.((((((((..((((((((((((.((((.((.((..(....)..)).)))))).)))))))))))).)))))))).))))))...)).

Structure

-  uug  c    u        UU            G    A  g  ua g 
 cg   cu gugc aucucgug  ACGUAUACUGAA GUAU CC ga  g a
 ||   || |||| ||||||||  |||||||||||| |||| || ||  |  
 gc   ga cacg uggagcAU  UGCAUAUGACUU CAUA GG cu  c u
c  uaa  -    c        -U            A    -  A  ca a 

Annotation confidence Not enough data

Genome context

chr3R: 8791201-8791300 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-iab-8

Mature dsi-miR-iab-8-5p

• Accession: MIMAT0012504
• Description: Drosophila simulans dsi-miR-iab-8-5p mature miRNA
• Sequence: 22 - UUACGUAUACUGAAGGUAUACC - 43
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-iab-8-3p

• Accession: MIMAT0012505
• Description: Drosophila simulans dsi-miR-iab-8-3p mature miRNA
• Sequence: 59 - AGGAUACAUUCAGUAUACGUUUA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9