Stem-loop dme-mir-2490

Accession

MI0011579

Description

Drosophila melanogaster dme-mir-2490 precursor miRNA

Sequence

16 reads, 8 reads per million, 7 experiments

gagcgaguUGAAGCGAUAAAGCAGGUUGCAAacugcucucucgcuuUGCUCUUACUUUAUCGCUUAAacucgcaa
..(((((((.(((((((((((.(((..(((((..((......))))))).))).))))))))))).)))))))..

Structure

ga       G           C   UU     cu  uc 
  gcgaguU AAGCGAUAAAG AGG  GCAAa  gc  u
  ||||||| ||||||||||| |||  |||||  ||   
  cgcucaA UUCGCUAUUUC UUC  CGUuu  cg  c
aa       A           A   -U     --  cu 

Annotation confidence Not enough data

Genome context

chr2L: 23168825-23168899 [+]

Mature dme-miR-2490-5p

• Accession: MIMAT0012197
• Description: Drosophila melanogaster dme-miR-2490-5p mature miRNA
• Sequence: 9 - UGAAGCGAUAAAGCAGGUUGCAA - 31
• Evidence: experimental ; Illumina [1]

Mature dme-miR-2490-3p

• Accession: MIMAT0020911
• Description: Drosophila melanogaster dme-miR-2490-3p mature miRNA
• Sequence: 47 - UGCUCUUACUUUAUCGCUUAA - 67
• Evidence: not_experimental

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9