miRBase entry: dps-mir-307b

Stem-loop dps-mir-307b


Accession
MI0011623
Description
Drosophila pseudoobscura dps-mir-307b precursor miRNA


Sequence

uccugcuaucgcucacucaaggagguugugauggauaccauaucgaaauaacaUCACACCCAGGUUGAGUGAGUCaaagcaagac
((.((((...((((((((((...((.(((((((..................))))))).))...))))))))))...)))).)).

Structure
-  c    auc          gga  u       gauaccau 
 uc ugcu   gcucacucaa   gg ugugaug        a
 || ||||   ||||||||||   || |||||||         
 ag acga   UGAGUGAGUU   CC ACACUac        u
c  a    aaC          GGA  C       aauaaagc 


Annotation confidence Not enough data
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Genome context
3: 14135704-14135788 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dps-mir-307b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-307b

Accession MIMAT0012281
Description Drosophila pseudoobscura dps-miR-307b mature miRNA
Sequence 54 - UCACACCCAGGUUGAGUGAGUC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9