Stem-loop dps-mir-2515

Accession

MI0011642

Description

Drosophila pseudoobscura dps-mir-2515 precursor miRNA

Sequence

ccuaggauacgccUGAUGAGUGUUUUCCCAAUUUgacuguggugguuguggguagacccuacagccucuauaauuggcagugugggagccaacacaguuggcacacuuggg
((((((....(((.(((..(((((((((((..(((..(((((.(((((((((.....))))))))).))))).....)))..))))))..))))).))))))...))))))

Structure

      auac   U   GA     --      AU   ---ac     u         u 
ccuagg    gcc GAU  GUGUU  UUCCCA  UUg     ugugg gguuguggg a
||||||    ||| |||  |||||  ||||||  |||     ||||| ||||||||| g
ggguuc    cgg uug  cacaa  gagggu  gac     auauc ccgacaucc a
      -aca   -   -a     cc      gu   gguua     u         c 

Annotation confidence Not enough data

Genome context

Unknown_singleton_3915: 296-406 [-]

Mature dps-miR-2515

• Accession: MIMAT0012300
• Description: Drosophila pseudoobscura dps-miR-2515 mature miRNA
• Sequence: 14 - UGAUGAGUGUUUUCCCAAUUU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9