Stem-loop dps-mir-2570

Accession

MI0011719

Description

Drosophila pseudoobscura dps-mir-2570 precursor miRNA

Sequence

gcgucuugcaugugggacaggUAGUAUGGGUCUUGACAUGUGACUcaauacaagUUUUGUGAAACUCGUGGCUGCAcuuuguuuucaauguaggagccgaagc
((.((((((((..((((((((((((((((((.((.(((...((((.......)))).))).)))))))).)))))...)))))))..))))))))))......

Structure

------  g        gu       ---     -      C  G   UGU    ca 
      gc ucuugcau  gggacag   gUAGU AUGGGU UU ACA   GACU  a
      || ||||||||  |||||||   ||||| |||||| || |||   ||||  u
      cg aggaugua  uuuuguu   CGUCG UGCUCA AA UGU   UUga  a
cgaagc  -        ac       ucA     G      -  G   --U    ac 

Annotation confidence Not enough data

Genome context

Unknown_group_377: 23153-23255 [-]

Mature dps-miR-2570-5p

• Accession: MIMAT0012410
• Description: Drosophila pseudoobscura dps-miR-2570-5p mature miRNA
• Sequence: 22 - UAGUAUGGGUCUUGACAUGUGACU - 45
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2570-3p

• Accession: MIMAT0012411
• Description: Drosophila pseudoobscura dps-miR-2570-3p mature miRNA
• Sequence: 55 - UUUUGUGAAACUCGUGGCUGCA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9