Stem-loop dme-mir-2489

Accession

MI0011578

Description

Drosophila melanogaster dme-mir-2489 precursor miRNA mir-2489

Gene
family

RF03750; mir-2489

Sequence

355 reads, 6 reads per million, 35 experiments

gcaaUAAGUUAGACGUGAGUAUGGCUAUACAAAucaucuggaacguaaguucuaauguaugUAUUGUAUGUUGUAUUUGCAGUuuuaugauagca
((.((..((.(((((((((((((((.((((((..((((((((((....))))))..).)))..))))))))))))))))).)))).)).)).)).

Structure

-  a  AA  U    -           U      Au   - --      g 
 gc aU  GU AGAC GUGAGUAUGGC AUACAA  cau c  uggaac u
 || ||  || |||| ||||||||||| ||||||  ||| |  ||||||  
 cg ua  ua uuUG CGUUUAUGUUG UAUGUU  gua g  aucuug a
a  a  -g  u    A           -      AU   u ua      a 

Annotation confidence Not enough data

Genome context

chr2L: 13609974-13610068 [+]

Mature dme-miR-2489-3p

• Accession: MIMAT0012196
• Description: Drosophila melanogaster dme-miR-2489-3p mature miRNA
• Sequence: 62 - UAUUGUAUGUUGUAUUUGCAGU - 83
• Evidence: experimental ; Illumina [1]

Mature dme-miR-2489-5p

• Accession: MIMAT0020910
• Description: Drosophila melanogaster dme-miR-2489-5p mature miRNA
• Sequence: 5 - UAAGUUAGACGUGAGUAUGGCUAUACAAA - 33
• Evidence: not_experimental

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9