miRBase entry: dps-mir-2529

Stem-loop dps-mir-2529


Accession
MI0011663
Description
Drosophila pseudoobscura dps-mir-2529 precursor miRNA


Sequence

gccgguuuugggcaaAAUUAUCGUGUCACUCAUUAUUcaacgcauuuuuacuucggggaaggcaaaaugcguagaaaagugggugacaggauaauguuggaucgaagcgggca
(((.(((((((.(((.((((((.(((((((((((.(((.(((((((((..((((...))))..))))))))).))).))))))))))).)))))).)))..))))))).))).

Structure
-   g       -g   A      G           A   a         ua    g 
 gcc guuuugg  caa AUUAUC UGUCACUCAUU UUc acgcauuuu  cuuc  
 ||| |||||||  ||| |||||| ||||||||||| ||| |||||||||  |||| g
 cgg cgaagcu  guu uaauag acaguggguga aag ugcguaaaa  gaag  
a   g       ag   g      g           a   a         cg    g 


Annotation confidence Not enough data
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Genome context
3: 10934590-10934702 [+]

Database links

Mature dps-miR-2529

Accession MIMAT0012318
Description Drosophila pseudoobscura dps-miR-2529 mature miRNA
Sequence 16 - AAUUAUCGUGUCACUCAUUAUU - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9