Stem-loop dps-mir-2558-1

Accession

MI0011701

Description

Drosophila pseudoobscura dps-mir-2558-1 precursor miRNA

Sequence

uaugguuagGUAGGUACCCAAAUAUCUUGAUuauaauuuuccuuuaggaacuuacaCAGAUAUUUCUGUACCUACAGgaauugu
.........((((((((..((((((((((....(((..((((....)))).))))).))))))))..)))))))).........

Structure

uaugguuag        CC        -  AUua   uu    u 
         GUAGGUAC  AAAUAUCU UG    uaa  uucc u
         ||||||||  |||||||| ||    |||  ||||  
         CAUCCAUG  UUUAUAGA ac    auu  aagg u
uguuaagGA        UC        C  ----   -c    a 

Annotation confidence Not enough data

Genome context

4_group1: 2593451-2593534 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-2558-1

Mature dps-miR-2558-5p

• Accession: MIMAT0012378
• Description: Drosophila pseudoobscura dps-miR-2558-5p mature miRNA
• Sequence: 10 - GUAGGUACCCAAAUAUCUUGAU - 31
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2558-3p

• Accession: MIMAT0012379
• Description: Drosophila pseudoobscura dps-miR-2558-3p mature miRNA
• Sequence: 57 - CAGAUAUUUCUGUACCUACAG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9