Stem-loop dsi-mir-988

Accession

MI0011736

Description

Drosophila simulans dsi-mir-988 precursor miRNA

Gene family

MIPF0000724; mir-988

Sequence

gauggcgguaccgggcauuuuggguGUGUGAUUUGUAGCAAAGUGAUAuguauuugaucauCCCCUUGUUGCAAACCUCACGCcaaagaugaucugagaaauacacagugau
.((.(((((((((((((((((.((((((.(.((((((((((.(((((.........)))))....)))))))))).).)))))).)))))).)))).)...))).).)).))

Structure

g  g  - -   --- -    -      g      U A          ---A     Aug 
 au gc g gua   c cggg cauuuu gguGUG G UUUGUAGCAA    GUGAU   u
 || || | |||   | |||| |||||| |||||| | ||||||||||    |||||   a
 ua ug c cau   g gucu guagaa cCGCAC C AAACGUUGUU    uacua   u
-  g  a a   aaa a    a      a      U C          CCCC     guu 

Annotation confidence Not enough data

Genome context

Unknown

Mature dsi-miR-988-5p

• Accession: MIMAT0012435
• Description: Drosophila simulans dsi-miR-988-5p mature miRNA
• Sequence: 26 - GUGUGAUUUGUAGCAAAGUGAUA - 48
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-988-3p

• Accession: MIMAT0012436
• Description: Drosophila simulans dsi-miR-988-3p mature miRNA
• Sequence: 62 - CCCCUUGUUGCAAACCUCACGC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9