Stem-loop dsi-mir-982b

Accession

MI0011783

Description

Drosophila simulans dsi-mir-982b precursor miRNA

Sequence

aguuaaaaaacaaaaucaugcuagaucaagaacaAAUAUCAUGUAAAUUGAuuuuuuaaaucAACUACACGAUAUUCGUUCUUGagcuuaaugguucuagagcu
.............((((((...((.((((((((.((((((.((((..(((((((...))))))).)))).)))))).)))))))).))..))))))........

Structure

aguuaaaaaacaa      gcu  a        a      A    AA       u 
             aaucau   ag ucaagaac AAUAUC UGUA  UUGAuuu  
             ||||||   || |||||||| |||||| ||||  ||||||| u
             uuggua   uc aGUUCUUG UUAUAG ACAU  AAcuaaa  
-----ucgagauc      -au  g        C      C    -C       u 

Annotation confidence Low

Genome context

chrX: 3273921-3274024 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-982b

Mature dsi-miR-982b-3p

• Accession: MIMAT0012514
• Description: Drosophila simulans dsi-miR-982b-3p mature miRNA
• Sequence: 63 - AACUACACGAUAUUCGUUCUUG - 84
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-982b-5p

• Accession: MIMAT0037360
• Description: Drosophila simulans dsi-miR-982b-5p mature miRNA
• Sequence: 35 - AAUAUCAUGUAAAUUGA - 51
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250