miRBase entry: dps-mir-2576-1

Stem-loop dps-mir-2576-1


Accession
MI0011727
Description
Drosophila pseudoobscura dps-mir-2576-1 precursor miRNA


Sequence

cggcgaucgggucuCUCGAGUGUGGAGAGCAUGGGAguuggcggacacaugagaguuccaccaugaaccucguccagcccacucucaucucauccgcccgcucgagaggucgcgaucguc
.((((((((.(((((((((((((((((((.((((((((.(((((((....(((.((((......))))))))))).))).))))))))))).)))))..)))))))))).).))))))))

Structure
c        g -          --     -   C        u   -    acau   a    ca 
 ggcgaucg g ucuCUCGAGU  GUGGA GAG AUGGGAgu ggc ggac    gag guuc  c
 |||||||| | ||||||||||  ||||| ||| |||||||| ||| ||||    ||| ||||   
 cugcuagc c ggagagcucg  cgccu cuc uacucuca ccg ccug    cuc caag  c
-        g u          cc     a   -        c   a    ----   -    ua 


Annotation confidence Not enough data
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Genome context
Unknown_group_319: 10719-10838 [+]

Database links

Mature dps-miR-2576

Accession MIMAT0012422
Description Drosophila pseudoobscura dps-miR-2576 mature miRNA
Sequence 15 - CUCGAGUGUGGAGAGCAUGGGA - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9