miRBase entry: dps-mir-2564

Stem-loop dps-mir-2564


Accession
MI0011708
Description
Drosophila pseudoobscura dps-mir-2564 precursor miRNA


Sequence

gaaguuuauaaaaccagaaacaaauuuuguGUAAAUGUGAUAAUUGUUUGUAAguuugcccuuaUAAUCAAUCUUAUUACGUUUAUAGuauaaugagcuggucuagcuc
............(((((............(((((((((((((((((.(((((((......))))))).))))..)))))))))))))..........))))).......

Structure
gaaguuuauaaa     aaacaaauuuug             --    U       uu 
            accag            uGUAAAUGUGAUA  AUUG UUGUAAg  u
            |||||            |||||||||||||  |||| |||||||   
            ugguc            AUAUUUGCAUUAU  UAAC AAUauuc  g
-----cucgauc     --gaguaauauG             UC    U       cc 


Annotation confidence Not enough data
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Genome context
4_group4: 1639565-1639673 [+]

Database links

Mature dps-miR-2564-5p

Accession MIMAT0012390
Description Drosophila pseudoobscura dps-miR-2564-5p mature miRNA
Sequence 31 - GUAAAUGUGAUAAUUGUUUGUAA - 53
Evidence experimental
Illumina [1]

Mature dps-miR-2564-3p

Accession MIMAT0012391
Description Drosophila pseudoobscura dps-miR-2564-3p mature miRNA
Sequence 65 - UAAUCAAUCUUAUUACGUUUAUAG - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9