Stem-loop dsi-mir-1006

Accession

MI0011740

Description

Drosophila simulans dsi-mir-1006 precursor miRNA

Gene family

MIPF0000873; mir-1006

Sequence

gucgacccgggucaacuuccagGUGAGUUUGAAAUUGAAAUGCGUAAAuuguuugguacaauuUAAAUUCGAUUUCUUAUUCAUAGgugcaauaccaguugau
((((((...(((......((..((((((..(((((((((.....((((((((.....))))))))..)))))))))..)))))).))......))).))))))

Structure

      ccg   caacuu  ag      UU         AUGCG        u 
gucgac   ggu      cc  GUGAGU  GAAAUUGAA     UAAAuugu u
||||||   |||      ||  ||||||  |||||||||     |||||||| g
uaguug   cca      gG  UACUUA  CUUUAGCUU     AUuuaaca g
      --a   uaacgu  -A      UU         ---AA        u 

Annotation confidence Not enough data

Genome context

chr2L: 16422877-16422979 [-]

Mature dsi-miR-1006-5p

• Accession: MIMAT0012443
• Description: Drosophila simulans dsi-miR-1006-5p mature miRNA
• Sequence: 23 - GUGAGUUUGAAAUUGAAAUGCGUAAA - 48
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-1006-3p

• Accession: MIMAT0012444
• Description: Drosophila simulans dsi-miR-1006-3p mature miRNA
• Sequence: 64 - UAAAUUCGAUUUCUUAUUCAUAG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9