miRBase entry: 20959416

microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate

PubMed ID 20959416
Authors "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
Journal "Proc Natl Acad Sci U S A
Volume 107
Pages 19379-19383

There are 244 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
pma-mir-1a MI0016999 None ref|NC_046083.1| 5668436 5668520 - -
pma-mir-1b MI0017000 None ref|NC_046080.1| 13837263 13837348 + -
pma-mir-1c MI0017001 None ref|NC_046111.1| 10594871 10594962 + -
pma-mir-1d MI0017002 None ref|NC_046080.1| 13837256 13837355 - -
pma-mir-7a-1 MI0017003 None ref|NC_046108.1| 8938318 8938405 + -
pma-mir-7a-2 MI0017004 None ref|NC_046081.1| 7296537 7296627 - -
pma-mir-7b MI0017005 None ref|NC_046120.1| 7388922 7389018 + -
pma-mir-9a-1 MI0017006 None ref|NC_046108.1| 4385175 4385261 + -
pma-mir-9a-2 MI0017007 None ref|NC_046069.1| 28947940 28948028 + -
pma-mir-9b MI0017008 None ref|NC_046108.1| 4385175 4385261 - -
pma-mir-10b MI0017009 None ref|NC_046070.1| 1266538 1266628 + -
pma-mir-10a MI0017010 None ref|NC_046072.1| 6296290 6296382 - -
pma-mir-15a MI0017011 None ref|NC_046123.1| 1714260 1714334 - -
pma-mir-15b MI0017012 None ref|NW_022638143.1| 26040 26123 + -
pma-mir-16a MI0017013 None ref|NC_046089.1| 3364255 3364329 + -
pma-mir-17a MI0017014 None ref|NC_046115.1| 748750 748831 + -
pma-mir-17b MI0017015 None ref|NC_046115.1| 749665 749758 + -
pma-mir-17c MI0017016 None ref|NC_046132.1| 1979748 1979843 + -
pma-mir-18a MI0017017 None ref|NC_046132.1| 1977181 1977277 + -
pma-mir-18b MI0017018 None ref|NC_046115.1| 749042 749132 + -
pma-mir-19a MI0017019 None ref|NC_046132.1| 1980031 1980125 + -
pma-mir-19b-1 MI0017020 None ref|NC_046115.1| 752187 752270 + -
pma-mir-19c MI0017021 None ref|NC_046115.1| 750365 750444 + -
pma-mir-20a MI0017022 None ref|NC_046115.1| 751982 752072 + -
pma-mir-20b MI0017023 None ref|NC_046132.1| 1982797 1982890 + -
pma-mir-22a MI0017024 None ref|NC_046073.1| 16942587 16942682 - -
pma-mir-22b MI0017025 None ref|NC_046106.1| 10906039 10906119 - -
pma-mir-23a MI0017026 None ref|NC_046103.1| 7155804 7155881 - -
pma-mir-23b MI0017027 None ref|NC_046069.1| 795025 795109 - -
pma-mir-24 MI0017028 None ref|NC_046103.1| 7153235 7153328 - -
pma-mir-25b MI0017029 None ref|NC_046115.1| 754295 754385 + -
pma-mir-26a-1 MI0017030 None ref|NC_046072.1| 10549234 10549320 - -
pma-mir-26a-2 MI0017031 None ref|NC_046070.1| 25665226 25665316 + -
pma-mir-26b MI0017032 None ref|NC_046102.1| 6813082 6813170 + -
pma-mir-27a MI0017033 None ref|NC_046103.1| 7153875 7153949 - -
pma-mir-27b MI0017034 None ref|NC_046069.1| 793373 793447 - -
pma-mir-29a MI0017035 None ref|NC_046098.1| 8340095 8340177 - -
pma-mir-29b MI0017036 None ref|NC_046082.1| 14311942 14312020 - -
pma-mir-29c MI0017037 None ref|NC_046082.1| 14313104 14313195 - -
pma-mir-29d MI0017038 None ref|NC_046098.1| 8341159 8341244 - -
pma-mir-30a MI0017039 None ref|NC_046095.1| 8724544 8724619 + -
pma-mir-30b MI0017040 None ref|NC_046083.1| 11307690 11307784 - -
pma-mir-30c MI0017041 None ref|NC_046080.1| 2710046 2710134 - -
pma-mir-30d MI0017042 None ref|NW_022638108.1| 592651 592734 - -
pma-mir-30e MI0017043 None ref|NC_046095.1| 8723753 8723832 + -
pma-mir-30f-1 MI0017044 None ref|NC_046080.1| 2700968 2701045 - -
pma-mir-30f-2 MI0017045 None ref|NC_046083.1| 11295440 11295520 - -
pma-mir-30g MI0017046 None ref|NC_046095.1| 8724816 8724898 + -
pma-mir-31 MI0017047 None None None -
pma-mir-33a MI0017048 None ref|NC_046094.1| 312237 312320 - -
pma-mir-33b MI0017049 None ref|NC_046140.1| 1502762 1502838 + -
pma-mir-92a MI0017050 None ref|NC_046115.1| 752402 752481 + -
pma-mir-96a MI0017051 None ref|NC_046104.1| 2252292 2252372 - -
pma-mir-100a MI0017052 None ref|NC_046100.1| 8228211 8228299 + -
pma-mir-100b MI0017053 None ref|NC_046130.1| 3628179 3628272 + -
pma-mir-100c MI0017054 None ref|NC_046100.1| 8228209 8228296 - -
pma-mir-103a MI0017055 None ref|NC_046077.1| 13031126 13031208 + -
pma-mir-103b MI0017056 None ref|NC_046097.1| 13332353 13332429 + -
pma-mir-124-1 MI0017057 None ref|NC_046071.1| 1967896 1967974 + -
pma-mir-125a MI0017058 None ref|NC_046100.1| 8251833 8251922 + -
pma-mir-126 MI0017059 None ref|NC_046073.1| 1914703 1914774 + -
pma-mir-128-1 MI0017060 None ref|NC_046078.1| 9991844 9991932 + -
pma-mir-128-2 MI0017061 None ref|NC_046070.1| 11831267 11831355 - -
pma-mir-129a MI0017062 None ref|NC_046075.1| 14326334 14326421 - -
pma-mir-130d MI0017063 None ref|NC_046073.1| 9819097 9819178 + -
pma-mir-130e MI0017064 None ref|NW_022638183.1| 736512 736599 + -
pma-mir-130a MI0017065 None ref|NC_046073.1| 9804234 9804319 + -
pma-mir-130b MI0017066 None None None -
pma-mir-130c-1 MI0017067 None ref|NW_022638183.1| 735195 735284 + -
pma-mir-132a MI0017068 None None None -
pma-mir-133a-1 MI0017069 None ref|NC_046091.1| 2255628 2255705 + -
pma-mir-133b MI0017070 None ref|NC_046111.1| 10633021 10633110 + -
pma-mir-135a MI0017071 None ref|NC_046082.1| 3811987 3812072 + -
pma-mir-135b MI0017072 None ref|NC_046098.1| 7520125 7520211 - -
pma-mir-137-1 MI0017073 None ref|NC_046103.1| 528007 528095 + -
pma-mir-137-2 MI0017074 None ref|NC_046112.1| 8645697 8645785 + -
pma-mir-138a MI0017075 None ref|NC_046122.1| 1115162 1115241 - -
pma-mir-138b MI0017076 None ref|NC_046113.1| 8496733 8496817 + -
pma-mir-140-1 MI0017077 None ref|NC_046131.1| 1629110 1629187 - -
pma-mir-143 MI0017078 None ref|NC_046089.1| 6110943 6111012 + -
pma-mir-144 MI0017079 None ref|NC_046106.1| 1186815 1186892 - -
pma-mir-145 MI0017080 None ref|NC_046089.1| 6112196 6112276 + -
pma-mir-146 MI0017081 None ref|NC_046079.1| 15291607 15291681 - -
pma-mir-147 MI0017082 None ref|NC_046125.1| 6551852 6551938 + -
pma-mir-152a MI0017083 None ref|NC_046087.1| 12147442 12147533 + -
pma-mir-152b-1 MI0017084 None ref|NC_046070.1| 1713910 1713998 + -
pma-mir-153-1 MI0017085 None ref|NC_046072.1| 547234 547309 - -
pma-mir-153-2 MI0017086 None ref|NC_046087.1| 10331156 10331231 + -
pma-mir-153-3 MI0017087 None ref|NC_046102.1| 491755 491832 - -
pma-mir-155 MI0017088 None ref|NC_046100.1| 1740980 1741060 - -
pma-mir-181a-1 MI0017089 None ref|NC_046090.1| 2946530 2946608 - -
pma-mir-181b-1 MI0017090 None ref|NC_046090.1| 2942227 2942325 - -
pma-mir-182 MI0017091 None ref|NC_046104.1| 2252099 2252181 - -
pma-mir-183 MI0017092 None ref|NC_046114.1| 7244242 7244327 + -
pma-mir-184a MI0017093 None ref|NC_046069.1| 29639161 29639243 - -
pma-mir-190a MI0017094 None ref|NC_046069.1| 19690188 19690267 - -
pma-mir-190b MI0017095 None ref|NC_046081.1| 12047760 12047849 + -
pma-mir-192 MI0017096 None ref|NC_046074.1| 5108743 5108827 + -
pma-mir-193 MI0017097 None ref|NC_046105.1| 10755155 10755234 + -
pma-mir-194 MI0017098 None ref|NC_046074.1| 5107944 5108030 + -
pma-mir-196a-1 MI0017099 None ref|NC_046078.1| 8134704 8134783 + -
pma-mir-196b MI0017100 None ref|NC_046124.1| 733287 733363 - -
pma-mir-199a MI0017101 None ref|NC_046090.1| 4834910 4834988 + -
pma-mir-199b MI0017102 None ref|NC_046118.1| 9684019 9684098 + -
pma-mir-200b MI0017103 None ref|NC_046107.1| 8650248 8650325 + -
pma-mir-203a MI0017104 None ref|NC_046101.1| 7616642 7616732 - -
pma-mir-203b MI0017105 None ref|NC_046085.1| 5367422 5367511 - -
pma-mir-204 MI0017106 None ref|NC_046125.1| 4465627 4465697 + -
pma-mir-205a MI0017107 None ref|NC_046082.1| 10653075 10653149 - -
pma-mir-205b MI0017108 None ref|NC_046116.1| 8977427 8977500 + -
pma-mir-208a MI0017109 None ref|NC_046131.1| 4522262 4522353 + -
pma-mir-210 MI0017110 None ref|NC_046092.1| 553238 553318 - -
pma-mir-212 MI0017111 None ref|NW_022638381.1| 2447 2535 + -
pma-mir-216a MI0017112 None ref|NC_046074.1| 1952339 1952422 - -
pma-mir-216b MI0017113 None ref|NC_046074.1| 1955046 1955134 - -
pma-mir-217a MI0017114 None ref|NC_046074.1| 1950980 1951048 - -
pma-mir-218a-1 MI0017115 None ref|NC_046098.1| 3240010 3240088 + -
pma-mir-218a-2 MI0017116 None ref|NC_046077.1| 12174134 12174225 - -
pma-mir-218b MI0017117 None ref|NC_046079.1| 14082486 14082575 - -
pma-mir-221 MI0017118 None ref|NC_046138.1| 4278397 4278476 - -
pma-mir-222 MI0017119 None ref|NC_046138.1| 4279186 4279277 - -
pma-mir-281a MI0017120 None ref|NC_046072.1| 10038692 10038778 + -
pma-mir-301a MI0017121 None ref|NC_046106.1| 983091 983189 - -
pma-mir-301b MI0017122 None ref|NC_046073.1| 9811579 9811666 + -
pma-mir-302 MI0017123 None ref|NC_046076.1| 2418130 2418226 - -
pma-mir-315 MI0017124 None ref|NC_046082.1| 2604175 2604251 + -
pma-mir-338b MI0017125 None ref|NC_046071.1| 19740622 19740703 + -
pma-mir-430f MI0017126 None ref|NW_022638665.1| 13016 13105 + -
pma-mir-375a MI0017127 None ref|NC_046070.1| 16994034 16994127 + -
pma-mir-375b MI0017128 None ref|NC_046078.1| 14800289 14800382 - -
pma-mir-429-1 MI0017129 None ref|NC_046107.1| 8664744 8664831 + -
pma-mir-430a MI0017130 None ref|NC_046134.1| 672880 672968 + -
pma-mir-430b MI0017131 None ref|NC_046134.1| 663403 663490 + -
pma-mir-430c MI0017132 None ref|NW_022638665.1| 2808 2889 + -
pma-mir-430d MI0017133 None ref|NW_022638665.1| 6413 6501 + -
pma-mir-430e MI0017134 None ref|NC_046076.1| 2416494 2416578 - -
pma-mir-451 MI0017135 None ref|NC_046106.1| 1186064 1186136 - -
pma-mir-456 MI0017136 None ref|NC_046074.1| 3682098 3682182 - -
pma-mir-459 MI0017137 None ref|NW_022639232.1| 6908 6999 - -
pma-mir-497 MI0017138 None ref|NC_046115.1| 2947646 2947727 + -
pma-mir-551 MI0017139 None ref|NC_046107.1| 2594930 2595004 + -
pma-mir-875 MI0017140 None ref|NC_046080.1| 10566482 10566563 + -
pma-mir-1329 MI0017141 None ref|NC_046095.1| 6741688 6741774 + -
pma-mir-1788a MI0017142 None ref|NC_046070.1| 17174886 17174966 + -
pma-mir-1788b MI0017143 None ref|NC_046070.1| 17174881 17174973 - -
pma-let-7a-1 MI0017144 None ref|NC_046098.1| 6023595 6023702 + -
pma-let-7a-2 MI0017145 None ref|NC_046114.1| 5799358 5799460 - -
pma-let-7a-3 MI0017146 None ref|NC_046082.1| 2075138 2075223 + -
pma-let-7a-4 MI0017147 None ref|NC_046100.1| 8235673 8235757 + -
pma-let-7b MI0017148 None ref|NC_046114.1| 5797934 5798024 - -
pma-let-7c MI0017149 None ref|NC_046116.1| 8594927 8595022 + -
pma-let-7d MI0017150 None ref|NC_046082.1| 2081948 2082033 + -
pma-mir-4541 MI0017151 None ref|NC_046136.1| 4814993 4815069 + -
pma-mir-4542 MI0017152 None ref|NC_046092.1| 9705002 9705095 - -
pma-mir-4543 MI0017153 None ref|NC_046098.1| 11451415 11451488 - -
pma-mir-4544 MI0017154 None ref|NC_046084.1| 9159176 9159261 - -
pma-mir-4545 MI0017155 None ref|NC_046071.1| 13966309 13966395 + -
pma-mir-4546 MI0017156 None ref|NC_046115.1| 9052104 9052190 - -
pma-mir-4547 MI0017157 None ref|NC_046121.1| 4522966 4523058 - -
pma-mir-4548 MI0017158 None ref|NC_046075.1| 9005664 9005743 + -
pma-mir-4549 MI0017159 None ref|NC_046127.1| 4385370 4385446 + -
pma-mir-4550 MI0017160 None ref|NC_046084.1| 6426563 6426662 + -
pma-mir-4551 MI0017161 None ref|NC_046121.1| 2195080 2195177 - -
pma-mir-4552 MI0017162 None ref|NC_046074.1| 5158646 5158722 + -
pma-mir-4553 MI0017163 None ref|NC_046077.1| 13399574 13399650 - -
pma-mir-4554 MI0017164 None ref|NC_046088.1| 1681423 1681509 - -
pma-mir-4555 MI0017165 None ref|NC_046147.1| 197922 198018 + -
pma-mir-4556 MI0017166 None ref|NC_046070.1| 12938567 12938644 - -
pma-mir-4557 MI0017167 None ref|NC_046071.1| 21798862 21798957 - -
pma-mir-4558 MI0017168 None ref|NC_046097.1| 5227906 5227989 - -
pma-mir-4559 MI0017169 None ref|NC_046097.1| 10555796 10555874 + -
pma-mir-4560 MI0017170 None ref|NW_022639232.1| 6757 6847 - -
pma-mir-4561 MI0017171 None ref|NC_046084.1| 14325349 14325427 + -
pma-mir-4562 MI0017172 None ref|NC_046093.1| 2529470 2529563 + -
pma-mir-4563 MI0017173 None ref|NC_046100.1| 3489102 3489181 + -
pma-mir-4564 MI0017174 None ref|NC_046083.1| 12453379 12453454 + -
pma-mir-4565 MI0017175 None ref|NC_046090.1| 3675191 3675273 - -
pma-mir-4566 MI0017176 None ref|NC_046117.1| 7961648 7961736 - -
pma-mir-4567 MI0017177 None ref|NC_046100.1| 1735919 1736001 - -
pma-mir-4568 MI0017178 None ref|NC_046070.1| 11084410 11084509 + -
pma-mir-4569 MI0017179 None ref|NC_046098.1| 1589081 1589162 - -
pma-mir-4570 MI0017180 None ref|NC_046074.1| 7818741 7818821 - -
pma-mir-4571 MI0017181 None ref|NC_046084.1| 7079044 7079134 - -
pma-mir-4572 MI0017182 None ref|NC_046121.1| 7144879 7144963 + -
pma-mir-4573 MI0017183 None ref|NC_046080.1| 5938168 5938249 + -
pma-mir-4574 MI0017184 None ref|NC_046074.1| 7819421 7819505 - -
pma-mir-4575 MI0017185 None ref|NC_046131.1| 7440940 7441021 + -
pma-mir-4576 MI0017186 None ref|NC_046077.1| 34002 34075 - -
pma-mir-4577 MI0017187 None ref|NC_046081.1| 12157885 12157959 + -
pma-mir-4578 MI0017188 None ref|NC_046092.1| 10595345 10595442 - -
pma-mir-4579 MI0017189 None ref|NC_046134.1| 5400301 5400378 + -
pma-mir-4580 MI0017190 None ref|NC_046102.1| 9140197 9140275 - -
pma-mir-4581 MI0017191 None ref|NC_046073.1| 18638421 18638499 + -
pma-mir-4582 MI0017192 None ref|NC_046121.1| 144351 144436 + -
pma-mir-4583 MI0017193 None ref|NC_046087.1| 312135 312211 - -
pma-mir-4584 MI0017194 None ref|NC_046081.1| 11743957 11744037 - -
pma-mir-4585 MI0017195 None ref|NC_046082.1| 13016445 13016525 - -
pma-mir-4586 MI0017196 None ref|NC_046091.1| 436386 436466 - -
pma-mir-4587 MI0017197 None ref|NC_046074.1| 14792565 14792672 - -
pma-mir-4588 MI0017198 None ref|NC_046071.1| 24784631 24784709 - -
pma-mir-4589 MI0017199 None ref|NC_046076.1| 3979914 3980003 + -
pma-mir-4590 MI0017200 None ref|NC_046121.1| 8990566 8990650 + -
pma-mir-4591 MI0017201 None ref|NC_046092.1| 10784046 10784122 + -
pma-mir-4592 MI0017202 None ref|NC_046088.1| 10752340 10752439 + -
pma-mir-4593 MI0017203 None ref|NC_046108.1| 4384777 4384853 + -
pma-mir-4594 MI0017204 None ref|NC_046082.1| 11755879 11755959 - -
pma-mir-4595 MI0017205 None ref|NC_046092.1| 4024443 4024527 - -
pma-mir-4596 MI0017206 None ref|NC_046072.1| 3896598 3896687 + -
pma-mir-4597 MI0017207 None ref|NC_046101.1| 12140982 12141076 - -
pma-mir-4598 MI0017208 None ref|NC_046101.1| 12070162 12070258 - -
pma-mir-4599a MI0017209 None ref|NC_046096.1| 11004270 11004350 - -
pma-mir-4599b MI0017210 None ref|NC_046096.1| 11005982 11006063 - -
pma-mir-4600 MI0017211 None ref|NC_046071.1| 7111802 7111868 + -
pma-mir-4601 MI0017212 None ref|NC_046118.1| 450328 450401 - -
pma-mir-4602 MI0017213 None ref|NC_046077.1| 3685935 3686018 - -
pma-mir-4603 MI0017214 None ref|NC_046108.1| 3726166 3726257 - -
pma-mir-4604 MI0017215 None ref|NC_046100.1| 12487277 12487364 - -
pma-mir-4605 MI0017216 None ref|NC_046075.1| 10629261 10629339 - -
pma-mir-4606 MI0017217 None ref|NW_022638467.1| 10026 10106 - -
pma-mir-4607 MI0017218 None ref|NC_046104.1| 12264709 12264794 - -
pma-mir-4608 MI0017219 None ref|NC_046110.1| 3653210 3653293 + -
pma-mir-4609 MI0017220 None ref|NW_022639061.1| 37731 37808 + -
pma-mir-4610 MI0017221 None ref|NC_046117.1| 10591721 10591811 - -
pma-mir-4611 MI0017222 None ref|NC_046125.1| 6137672 6137758 - -
pma-mir-4612 MI0017223 None ref|NC_046089.1| 13010606 13010698 + -
pma-mir-4613 MI0017224 None ref|NC_046120.1| 2583805 2583893 - -
pma-mir-4614 MI0017225 None ref|NC_046084.1| 14956178 14956255 + -
pma-mir-4615 MI0017226 None ref|NC_046122.1| 9214189 9214279 - -
pma-mir-4616 MI0017227 None ref|NC_046085.1| 2541227 2541299 + -
pma-mir-4617 MI0017228 None ref|NW_022638203.1| 447901 447998 + -
pma-mir-4618 MI0017229 None ref|NC_046093.1| 7948950 7949027 + -
pma-mir-4619 MI0017230 None ref|NC_046133.1| 6764836 6764933 - -
pma-mir-4620 MI0017231 None ref|NC_046133.1| 1691764 1691846 + -
pma-mir-4621 MI0017232 None ref|NC_046073.1| 18007596 18007675 - -
pma-mir-4622 MI0017233 None ref|NC_046080.1| 9081583 9081664 - -
pma-mir-4623 MI0017234 None ref|NC_046114.1| 4816255 4816338 + -
pma-mir-4624 MI0017235 None ref|NC_046082.1| 10307437 10307530 + -
pma-mir-4625 MI0017236 None ref|NC_046111.1| 1171513 1171601 + -
pma-mir-4626 MI0017237 None ref|NC_046077.1| 16031891 16031971 + -
pma-mir-4627 MI0017238 None ref|NC_046121.1| 4202489 4202563 + -
pma-mir-4628 MI0017239 None ref|NC_046115.1| 3766921 3767012 - -
pma-mir-4629 MI0017240 None ref|NW_022639073.1| 489364 489437 + -
pma-mir-4630 MI0017241 None ref|NC_046075.1| 11885612 11885704 - -
pma-mir-4631 MI0017242 None ref|NC_046071.1| 13627115 13627189 + -



Comments or questions? Email mirbase@gmail.com