Stem-loop pma-mir-4566

Accession

MI0017176

Description

Petromyzon marinus pma-mir-4566 precursor miRNA

Sequence

ugccgugcgauuUGUGCAGUGUGCAACGUUUGCUcgagcuaaacgcaaguacugugcauccccugugcgcugucaguuuguccacggug
.((((((.(((...(((((((((((..(..(((.((.(((.......)))..)).)))..)..))))))))).))....))))))))).

Structure

u      c   -uUG  -         AC UU   U  -a   aa 
 gccgug gau    UG CAGUGUGCA  G  UGC cg  gcu  a
 |||||| |||    || |||||||||  |  ||| ||  |||  c
 uggcac cug    ac gucgcgugu  c  acg gu  uga  g
g      -   uuug  u         cc cu   u  ca   ac 

Annotation confidence Not enough data

Genome context

GL477852.1: 8288-8376 [+]

Mature pma-miR-4566

• Accession: MIMAT0019598
• Description: Petromyzon marinus pma-miR-4566 mature miRNA
• Sequence: 13 - UGUGCAGUGUGCAACGUUUGCU - 34
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383