Stem-loop pma-mir-4567

Accession

MI0017177

Description

Petromyzon marinus pma-mir-4567 precursor miRNA

Sequence

ggcgcccuacgugaccgugguggugagcagagggcccucaggcugagcuguacUAAUGCUGUCAUGAUUGGGGUAUaugaugu
...((((((((((((.(((.((((((((....((((....))))..))).))))).))).))))))..)))))).........

Structure

------ggc      --      c   g     -   agag    c 
         gcccua  cgugac gug uggug agc    ggcc u
         ||||||  |||||| ||| ||||| |||    ||||  
         UGGGGU  GUACUG CGU AUcau ucg    ucgg c
uguaguaUA      UA      U   A     g   --ag    a 

Annotation confidence Not enough data

Genome context

GL476995.1: 164946-165028 [+]

Mature pma-miR-4567

• Accession: MIMAT0019599
• Description: Petromyzon marinus pma-miR-4567 mature miRNA
• Sequence: 54 - UAAUGCUGUCAUGAUUGGGGUAU - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383