Stem-loop pma-mir-4548

Accession

MI0017158

Description

Petromyzon marinus pma-mir-4548 precursor miRNA

Sequence

cggggcugugcgagggcaggccgggcgggggaggcaugcugccuggcUCCAUCUCCCAGCCGUGCCUGCCcgcagccgac
...((((((....(((((((((((..((((((((...(((....))).)).))))))..))).))))))))))))))...

Structure

cgg      gcga        -   gc      -  cau   g 
   ggcugu    gggcaggc cgg  ggggga gg   gcu c
   ||||||    |||||||| |||  |||||| ||   |||  
   ccgacg    cCCGUCCG GCC  CCCUCU CC   cgg c
cag      ----        U   GA      A  --U   u 

Annotation confidence Not enough data

Genome context

GL478432.1: 44731-44810 [-]

Mature pma-miR-4548

• Accession: MIMAT0019580
• Description: Petromyzon marinus pma-miR-4548 mature miRNA
• Sequence: 48 - UCCAUCUCCCAGCCGUGCCUGCC - 70
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383