Stem-loop pma-mir-4587

Accession

MI0017197

Description

Petromyzon marinus pma-mir-4587 precursor miRNA

Sequence

uuucaucgccagcgagcgcccgcuucacacaacacacacacacccacaucuauaauaucucuauaaccCGCUGUGUUUGUGAUGGGCCAGcgcguugucguugcug
...((.((.(((((.(((((((..(((((.((((((...................................))))))))))))))))..)).))))).)).))...

Structure

uuu  u  c     a  --     cu     c      cacacacccacaucua 
   ca cg cagcg gc  gcccg  ucaca aacaca                u
   || || ||||| ||  |||||  ||||| ||||||                a
   gu gc guugc cG  CGGGU  AGUGU UUGUGU                a
guc  u  u     g  AC     --     -      CGCccaauaucucuau 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-4587

• Accession: MIMAT0019620
• Description: Petromyzon marinus pma-miR-4587 mature miRNA
• Sequence: 69 - CGCUGUGUUUGUGAUGGGCCAG - 90
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383