Stem-loop pma-mir-4596

Accession

MI0017206

Description

Petromyzon marinus pma-mir-4596 precursor miRNA

Sequence

ucccagggucggagagcccggcgcugucgcaccagagcacgggugagacucccGGGUUUGGUGACAGCGUCAGAGCucugggcccugugc
...(((((((..((((((.(((((((((..((((((.(.((((.......))))).))))))))))))))).).))))).)))))))...

Structure

ucc       gg     - c         gc      g a    ug 
   caggguc  agagc c ggcgcuguc  accaga c cggg  a
   |||||||  ||||| | |||||||||  |||||| | ||||  g
   gucccgg  ucuCG G CUGCGACAG  UGGUUU G Gccc  a
cgu       -g     A A         --      G -    uc 

Annotation confidence Not enough data

Genome context

GL476944.1: 439753-439842 [-]

Mature pma-miR-4596

• Accession: MIMAT0019629
• Description: Petromyzon marinus pma-miR-4596 mature miRNA
• Sequence: 54 - GGGUUUGGUGACAGCGUCAGAGC - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383