Stem-loop pma-mir-182

Accession

MI0017091

Description

Petromyzon marinus pma-mir-182 precursor miRNA

Literature search

1 open access papers mention pma-mir-182
(1 sentences)

Sequence

ggcggacugugUUUGGCAAUGGUAGAACUCACACUggccagagagcucuccggggguucuagacuugccaauuacagucccac
...((((((((.(((((((...((((((((...((((..(((....)))))))))))))))...))))))).))))))))...

Structure

ggc        U       UGG        ACA    cc   g 
   ggacugug UUGGCAA   UAGAACUC   CUgg  aga a
   |||||||| |||||||   ||||||||   ||||  |||  
   ccugacau aaccguu   aucuuggg   ggcc  ucu g
cac        u       cag        ---    --   c 

Annotation confidence Not enough data

Genome context

ref|NC_046104.1|: 2252099-2252181 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-182

Mature pma-miR-182-5p

• Accession: MIMAT0019490
• Description: Petromyzon marinus pma-miR-182-5p mature miRNA
• Sequence: 12 - UUUGGCAAUGGUAGAACUCACACU - 35
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383