Stem-loop pma-mir-152b-1

Accession

MI0017084

Description

Petromyzon marinus pma-mir-152b-1 precursor miRNA

Sequence

ccaggcuuucgagccgaaguucugugauacacuugggcugugcugucaaggaagUCAGUGCAAAACAGAACUUUGguuggagagccgcg
...(((((((.((((((((((((((....((((..((((.(.((....)).)))))))))....)))))))))))))).)))))))...

Structure

cca       g              gaua    ug    g g  g 
   ggcuuuc agccgaaguucugu    cacu  ggcu u cu u
   ||||||| ||||||||||||||    ||||  |||| | ||  
   ccgagag uugGUUUCAAGACA    GUGA  CUga a ga c
gcg       g              AAAC    --    - g  a 

Annotation confidence Not enough data

Genome context

ref|NC_046070.1|: 1713910-1713998 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-152b-1

Mature pma-miR-152b-3p

• Accession: MIMAT0019482
• Description: Petromyzon marinus pma-miR-152b-3p mature miRNA
• Sequence: 55 - UCAGUGCAAAACAGAACUUUG - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383