Stem-loop pma-mir-19c

Accession

MI0017021

Description

Petromyzon marinus pma-mir-19c precursor miRNA

Sequence

ccucugucaguuuugcagauuugcacugcgguggugccucguucccaagcUGUGCAAAUCCCCUGCAAAACUGAuggcga
.(.(((((((((((((((((((((((.((...((.((...)).))...)).)))))))))...)))))))))))))).).

Structure

c u              ---         u  ggu  u  c 
 c cugucaguuuugca   gauuugcac gc   gg gc  
 | ||||||||||||||   ||||||||| ||   || || u
 g gguAGUCAAAACGU   CUAAACGUG cg   cc ug  
a c              CCC         U  aac  u  c 

Annotation confidence Not enough data

Genome context

GL478379.1: 404996-405075 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from pma-mir-19c

Mature pma-miR-19c

• Accession: MIMAT0019394
• Description: Petromyzon marinus pma-miR-19c mature miRNA
• Sequence: 51 - UGUGCAAAUCCCCUGCAAAACUGA - 74
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383