Stem-loop pma-mir-221

Accession

MI0017118

Description

Petromyzon marinus pma-mir-221 precursor miRNA

Literature search

1 open access papers mention pma-mir-221
(1 sentences)

Sequence

cgaggccuggaccuggcacacaguguaggagacuguguaaccauggcaacAGCUACAUUGUCUGCUGGGUUCagguugcc
.(.(((((((((((((((.(((((((((..(.(((((....)))))...)..))))))))).))))))))))))))).).

Structure

c a               c         ga --a     u 
 g ggccuggaccuggca acaguguag  g   cugug a
 | ||||||||||||||| |||||||||  |   |||||  
 c uuggaCUUGGGUCGU UGUUACAUC  c   gguac a
c g               C         GA aac     c 

Annotation confidence Not enough data

Genome context

ref|NC_046138.1|: 4278397-4278476 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-221

Mature pma-miR-221-3p

• Accession: MIMAT0019532
• Description: Petromyzon marinus pma-miR-221-3p mature miRNA
• Sequence: 51 - AGCUACAUUGUCUGCUGGGUUC - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383