Stem-loop pma-mir-4561

Accession

MI0017171

Description

Petromyzon marinus pma-mir-4561 precursor miRNA

Sequence

acccggcacucgcggcaugaucgauuggaccgguguugcgcccgugguUUUGGUGAUGAUUUUGAUGACGaggcugaag
...((((.((((((..((.((((...(((((((((...))))...)))))...)))).)).....)).))))))))...

Structure

acc    a    -  ---gc  g    auu     ---    u 
   cggc cucg cg     au aucg   ggacc   ggug  
   |||| |||| ||     || ||||   |||||   |||| u
   gucg gaGC GU     UA UAGU   UUugg   ccgc  
gaa    -    A  AGUUU  G    GGU     ugc    g 

Annotation confidence Not enough data

Genome context

GL486431.1: 6793-6871 [+]

Mature pma-miR-4561

• Accession: MIMAT0019593
• Description: Petromyzon marinus pma-miR-4561 mature miRNA
• Sequence: 49 - UUUGGUGAUGAUUUUGAUGACG - 70
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383