Stem-loop pma-mir-30b

Accession

MI0017040

Description

Petromyzon marinus pma-mir-30b precursor miRNA

Sequence

uggacagggugggagcUGUAAACAUCCCUGACUGGAAGCUgggagcacuugcugcggcagcuuucgcccggauguuugcugcugccaucugucaa
..((((((.(((.(((.((((((((((.....((((((((((.(((....))).)..)))))))))...)))))))))).))).)))))))))..

Structure

ug      g   g   U          CUGAC         -- g   a 
  gacagg ugg agc GUAAACAUCC     UGGAAGCUg  g agc c
  |||||| ||| ||| ||||||||||     |||||||||  | |||  
  cugucu acc ucg cguuuguagg     gcuuucgac  c ucg u
aa      -   g   u          --ccc         gg g   u 

Annotation confidence Not enough data

Genome context

GL476359.1: 505642-505736 [-]

Mature pma-miR-30b

• Accession: MIMAT0019424
• Description: Petromyzon marinus pma-miR-30b mature miRNA
• Sequence: 17 - UGUAAACAUCCCUGACUGGAAGCU - 40
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383