Stem-loop pma-mir-4555

Accession

MI0017165

Description

Petromyzon marinus pma-mir-4555 precursor miRNA

Sequence

agcagcaggaGCCACAUGAUGAGAGAGAUGAGuugcggaucgcugagcgaaugucgacccaacaucuaucaccccuuucugauggcuccucaaccuc
......((((((((((....(((((.(((((((((.((.((((.........).))))))))).)).)))....))))))).)))))))).......

Structure

-agcagc        -  UGAU     ---A   -  -    c  a   - uga 
       aggaGCCA CA    GAGAG    GAU GA Guug gg ucg c   g
       |||||||| ||    |||||    ||| || |||| || ||| |   c
       uccucggu gu    cuuuc    cua cu caac cc agc g   g
cuccaac        a  ----     ccca   u  a    -  -   u uaa 

Annotation confidence Not enough data

Genome context

GL477983.1: 6418-6514 [+]

Mature pma-miR-4555

• Accession: MIMAT0019587
• Description: Petromyzon marinus pma-miR-4555 mature miRNA
• Sequence: 11 - GCCACAUGAUGAGAGAGAUGAG - 32
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383