Stem-loop pma-mir-4597

Accession

MI0017207

Description

Petromyzon marinus pma-mir-4597 precursor miRNA

Sequence

caaaugagaaacacagcgagacgcgugugcaacgacgcgauuaccgaugcgugucUCGCCGUGUUAUUUGCGUCUCGcuguguugucugcgucuc
...((((((((((((((((((((((.(((..(((..((((.(((......)))..)))))))..))).)))))))))))))))).))).)))...

Structure

caa   -   -                u   ca   ac    -u   cg 
   aug aga aacacagcgagacgcg gug  acg  gcga  uac  a
   ||| ||| |||||||||||||||| |||  |||  ||||  |||   
   ugc ucu uugugucGCUCUGCGU UAU  UGC  CGCU  gug  u
cuc   g   g                U   UG   --    cu   cg 

Annotation confidence Not enough data

Genome context

GL481093.1: 5777-5871 [-]

Mature pma-miR-4597

• Accession: MIMAT0019630
• Description: Petromyzon marinus pma-miR-4597 mature miRNA
• Sequence: 56 - UCGCCGUGUUAUUUGCGUCUCG - 77
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383