Stem-loop pma-mir-15a

Accession

MI0017011

Description

Petromyzon marinus pma-mir-15a precursor miRNA

Sequence

ggagcugUAGCAGCACGUAAUGGUUUGUAuuugggaugucaggaguuacagaccaugcugugcugccgcaguggc
...(((((.((((((((..(((((((((((((((....)))))...))))))))))..)))))))).)))))...

Structure

gga     A        UA          ---     g 
   gcugU GCAGCACG  AUGGUUUGUA   uuugg a
   ||||| ||||||||  ||||||||||   |||||  
   ugacg cgucgugu  uaccagacau   ggacu u
cgg     c        cg          uga     g 

Annotation confidence Not enough data

Genome context

ref|NC_046123.1|: 1714260-1714334 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-15a

Mature pma-miR-15a-5p

• Accession: MIMAT0019379
• Description: Petromyzon marinus pma-miR-15a-5p mature miRNA
• Sequence: 8 - UAGCAGCACGUAAUGGUUUGUA - 29
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383