Stem-loop pma-mir-4588

Accession

MI0017198

Description

Petromyzon marinus pma-mir-4588 precursor miRNA

Sequence

uaagauggCGUCGCUGUGAGUUCACCUUAGgcgccggaggucccgagagagcgaggggagaucaucgacauccauugcc
...(((((.((((..((((.(((.((((..((.((((.....))).)...)).))))))).))))))))..)))))...

Structure

uaa     -C    CU    G   A    AG  --g -   a 
   gaugg  GUCG  GUGA UUC CCUU  gc   c cgg g
   |||||  ||||  |||| ||| ||||  ||   | ||| g
   uuacc  cagc  uacu gag ggga  cg   g gcc u
ccg     ua    --    a   -    -g  aga a   c 

Annotation confidence Not enough data

Genome context

GL476845.1: 32702-32780 [+]

Mature pma-miR-4588

• Accession: MIMAT0019621
• Description: Petromyzon marinus pma-miR-4588 mature miRNA
• Sequence: 9 - CGUCGCUGUGAGUUCACCUUAG - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383