Stem-loop pma-mir-140-1

Accession

MI0017077

Description

Petromyzon marinus pma-mir-140-1 precursor miRNA

Sequence

ucgaccgcuCAGUGGUUUUACCCUAUGGUAGcuuugaauggcagacucuaccacaugguagaaucacggcccggugac
...((((....(((((((((((...((((((.((((.....))))..))))))...)))))))))))....))))...

Structure

ucg    cuCA           CUA      -c    a 
   accg    GUGGUUUUACC   UGGUAG  uuug a
   ||||    |||||||||||   ||||||  |||| u
   uggc    cacuaagaugg   accauc  agac g
cag    ccgg           uac      uc    g 

Annotation confidence Not enough data

Genome context

ref|NC_046131.1|: 1629110-1629187 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-140-1

Mature pma-miR-140-5p

• Accession: MIMAT0019471
• Description: Petromyzon marinus pma-miR-140-5p mature miRNA
• Sequence: 10 - CAGUGGUUUUACCCUAUGGUAG - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383