Stem-loop pma-mir-4571

Accession

MI0017181

Description

Petromyzon marinus pma-mir-4571 precursor miRNA

Sequence

gaccugugcguguauAUGGAAUAUAUGUACACACAGGauauuacauaaucuacgUGUGUGUGCAGUAUAUUACAUUUaugagcuacaguac
...((((((.((((.(((..(((((((((((((((((((........))))...)))))))))).)))))..))).)))).)).))))...

Structure

gac    -  g    u   GA     -          ---    auu 
   cugu gc ugua AUG  AUAUA UGUACACACA   GGau   a
   |||| || |||| |||  ||||| ||||||||||   ||||    
   gaca cg guaU UAC  UAUAU ACGUGUGUGU   ucua   c
cau    u  a    U   AU     G          gca    aua 

Annotation confidence Not enough data

Genome context

GL476329.1: 1110152-1110242 [-]

Mature pma-miR-4571-5p

• Accession: MIMAT0019603
• Description: Petromyzon marinus pma-miR-4571-5p mature miRNA
• Sequence: 16 - AUGGAAUAUAUGUACACACAGG - 37
• Evidence: experimental ; 454 [1]

Mature pma-miR-4571-3p

• Accession: MIMAT0019604
• Description: Petromyzon marinus pma-miR-4571-3p mature miRNA
• Sequence: 55 - UGUGUGUGCAGUAUAUUACAUUU - 77
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383