Stem-loop pma-mir-4610

Accession

MI0017221

Description

Petromyzon marinus pma-mir-4610 precursor miRNA

Sequence

ccaucuucgauAACGUGCAGCCUCCAGGUGUUUCUcugggcgucauugcgauggaaacgccgagcagguucacuccaccuuaucaagacac
...((((.(((((.(((.((((((..(((((((((....(((....)))...)))))))))..).))))).....))).)))))))))...

Structure

cca    c     C   ----C     - CA         cugg   u 
   ucuu gauAA GUG     AGCCU C  GGUGUUUCU    gcg c
   |||| ||||| |||     ||||| |  |||||||||    |||  
   agaa cuauu cac     uugga g  ccgcaaagg    cgu a
cac    -     c   cucac     c ag         -uag   u 

Annotation confidence Not enough data

Genome context

GL476547.1: 547046-547136 [+]

Mature pma-miR-4610

• Accession: MIMAT0019644
• Description: Petromyzon marinus pma-miR-4610 mature miRNA
• Sequence: 12 - AACGUGCAGCCUCCAGGUGUUUCU - 35
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383