Stem-loop pma-mir-199a

Accession

MI0017101

Description

Petromyzon marinus pma-mir-199a precursor miRNA

Sequence

guuccgucucCCCAGUGUUCAGACUACCUGUUCaggagguuaauguuguaCAGUAGUCUGCACAUUGGUUAgacugagc
((((.((((..(((((((.((((((((.(((.(((.(......).))).))))))))))).)))))))..)))).))))

Structure

    c    cC       U        C   U   g gg 
guuc gucu  CCAGUGU CAGACUAC UGU Cag a  u
|||| ||||  ||||||| |||||||| ||| ||| |   
cgag cagA  GGUUACA GUCUGAUG ACa guu u  u
    u    UU       C        -   u   g aa 

Annotation confidence Not enough data

Genome context

GL476397.1: 465339-465417 [-]

Mature pma-miR-199a-5p

• Accession: MIMAT0019505
• Description: Petromyzon marinus pma-miR-199a-5p mature miRNA
• Sequence: 11 - CCCAGUGUUCAGACUACCUGUUC - 33
• Evidence: experimental ; 454 [1]

Mature pma-miR-199a-3p

• Accession: MIMAT0019506
• Description: Petromyzon marinus pma-miR-199a-3p mature miRNA
• Sequence: 51 - CAGUAGUCUGCACAUUGGUUA - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383