Stem-loop pma-mir-218a-1

Accession

MI0017115

Description

Petromyzon marinus pma-mir-218a-1 precursor miRNA

Sequence

gccgucccugccUUGUGCUUGAUCUAACCAUGUGcugccccaaacaacAUGGUUUGUUCAUGCACCAGGUagaggcaug
...(((.((((((.((((.(((.(.((((((((.............)))))))).).))).)))).)))))).)))...

Structure

gcc   c      U    U   U U        Gcugc 
   guc cugccU GUGC UGA C AACCAUGU     c
   ||| |||||| |||| ||| | ||||||||     c
   cgg gaUGGA CACG ACU G UUGGUAca     c
gua   a      C    U   U U        acaaa 

Annotation confidence Not enough data

Genome context

GL476529.1: 128989-129067 [+]

Mature pma-miR-218a-3p

• Accession: MIMAT0019530
• Description: Petromyzon marinus pma-miR-218a-3p mature miRNA
• Sequence: 49 - AUGGUUUGUUCAUGCACCAGGU - 70
• Evidence: experimental ; 454 [1]

Mature pma-miR-218a-5p

• Accession: MIMAT0019529
• Description: Petromyzon marinus pma-miR-218a-5p mature miRNA
• Sequence: 13 - UUGUGCUUGAUCUAACCAUGUG - 34
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383