Stem-loop pma-mir-338b

Accession

MI0017125

Description

Petromyzon marinus pma-mir-338b precursor miRNA

Sequence

ggcagugggaacaaaucacagugacugcagagucggagauguggacagaacUCCAGUGUCUGUGAUUUCGUUCUccacucug
((.((((((((((((((((((..((((..(((((.............).))))))))..))))))))).)))).))))))).

Structure

-  c     -    -         ug    ca    - ggaga 
 gg agugg gaac aaaucacag  acug  gagu c     u
 || ||||| |||| |||||||||  ||||  |||| |     g
 uc ucacc CUUG UUUAGUGUC  UGAC  CUca g     u
g  -     U    C         UG    --    a acagg 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-338b

• Accession: MIMAT0019540
• Description: Petromyzon marinus pma-miR-338b mature miRNA
• Sequence: 52 - UCCAGUGUCUGUGAUUUCGUUCU - 74
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383