Stem-loop pma-mir-4606

Accession

MI0017217

Description

Petromyzon marinus pma-mir-4606 precursor miRNA

Sequence

gcagcgcaggcccgaggccucgccggcguaggcggccugccugguaccagucccUGCGUGCGGUGAGGUGGCCGGGGcacg
...((.(.((((....((((((((((((((((.(((.((........)))))))))))).))))))))))))).).))...

Structure

gca  g a    cgag         -       c   c  ccu 
   gc c ggcc    gccucgccg gcguagg ggc ug   g
   || | ||||    ||||||||| ||||||| ||| ||    
   cG G CCGG    UGGAGUGGC UGCGUcc cug ac   g
gca  G G    ----         G       -   -  cau 

Annotation confidence Not enough data

Genome context

GL476404.1: 157798-157878 [-]

Mature pma-miR-4606

• Accession: MIMAT0019640
• Description: Petromyzon marinus pma-miR-4606 mature miRNA
• Sequence: 55 - UGCGUGCGGUGAGGUGGCCGGGG - 77
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383