Stem-loop pma-mir-4590

Accession

MI0017200

Description

Petromyzon marinus pma-mir-4590 precursor miRNA

Sequence

gccgugggcccguggggcgguucgcacgcuccaucuggacgggagacaacACGGGGGAGUGGGGCCACCUGCgcguguccauccc
...((((((.(((((((.(((((...((((((.((((....(....)....))))))))))))))).))).)))).))))))...

Structure

gcc      c    -   c     gca      a    gacg g 
   gugggc cgug ggg gguuc   cgcucc ucug    g a
   |||||| |||| ||| |||||   |||||| ||||    |  
   uaccug gcgC UCC CCGGG   GUGAGG GGGC    c g
ccc      u    G   A     ---      -    Acaa a 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-4590

• Accession: MIMAT0019623
• Description: Petromyzon marinus pma-miR-4590 mature miRNA
• Sequence: 51 - ACGGGGGAGUGGGGCCACCUGC - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383