Stem-loop pma-mir-430b

Accession

MI0017131

Description

Petromyzon marinus pma-mir-430b precursor miRNA

Sequence

gucuguucacguucacaacaacuucgagcgcucugcuuaauauguugacuggCAAGAGCUUGAAUGUUGUUGUGAaugugagucagac
(((((((((((((((((((((((((((((.((.((((.............)))))).))))))).))))))))))))))))).)))))

Structure

     -                 -       g  c    uaaua 
gucug uucacguucacaacaac uucgagc cu ugcu     u
||||| ||||||||||||||||| ||||||| || ||||     g
cagac gaguguaAGUGUUGUUG AAGUUCG GA ACgg     u
     u                 U       A  -    ucagu 

Annotation confidence Not enough data

Genome context

GL481024.1: 30645-30732 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-430b

Mature pma-miR-430b

• Accession: MIMAT0019549
• Description: Petromyzon marinus pma-miR-430b mature miRNA
• Sequence: 53 - CAAGAGCUUGAAUGUUGUUGUGA - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383