Stem-loop pma-mir-1d

Accession

MI0017002

Description

Petromyzon marinus pma-mir-1d precursor miRNA

Sequence

ugcugauucccacccagaacccauacuucuuuacauuccacgaucccagcucgcgcacgUGGCUUUAUAAAGAAGUACGUGCucuggcugggauuuauuc
...(((.(((((.(((((.(.(.((((((((((....(((((...............))))).....)))))))))).).).))))).))))).)))...

Structure

ugc   u     c     a c a          -cauu     auccca 
   uga uccca ccaga c c uacuucuuua     ccacg      g
   ||| ||||| ||||| | | ||||||||||     |||||      c
   auu agggu ggucu G G AUGAAGAAAU     GGUgc      u
cuu   u     c     C U C          AUUUC     acgcgc 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-1d

• Accession: MIMAT0019369
• Description: Petromyzon marinus pma-miR-1d mature miRNA
• Sequence: 60 - UGGCUUUAUAAAGAAGUACGUGC - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383