Stem-loop pma-mir-4564

Accession

MI0017174

Description

Petromyzon marinus pma-mir-4564 precursor miRNA

Sequence

gccuuuguuaagccuaaugacauuuuaaaacagcaaccuuaguauuGUUUGAAAUGUCAUUUGGCUUAauaaaaag
...(((((((((((.((((((((((((((.(((..((....)).))))))))))))))))).)))))))))))...

Structure

gcc           u              a   ca  c 
   uuuguuaagcc aaugacauuuuaaa cag  ac u
   ||||||||||| |||||||||||||| |||  ||  
   aaauaAUUCGG UUACUGUAAAGUUU Guu  ug u
gaa           U              -   -a  a 

Annotation confidence Not enough data

Genome context

GL479009.1: 180444-180519 [-]

Mature pma-miR-4564

• Accession: MIMAT0019596
• Description: Petromyzon marinus pma-miR-4564 mature miRNA
• Sequence: 47 - GUUUGAAAUGUCAUUUGGCUUA - 68
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383