Stem-loop pma-mir-133a-1

Accession

MI0017069

Description

Petromyzon marinus pma-mir-133a-1 precursor miRNA

Sequence

ugcuuugcuggagcugguaaaauggaaccagaucaacuaaccaacggauUUGGUCCCCUUCAACCAGCUUGagcuacg
......(((.((((((((..((.((.((((((((............)))))))).)).))..)))))))).)))....

Structure

ugcuuu   g        aa  u  a        aacua 
      gcu gagcuggu  aa gg accagauc     a
      ||| ||||||||  || || ||||||||      
      cga UUCGACCA  UU CC UGGUUuag     c
--gcau   G        AC  C  C        gcaac 

Annotation confidence Not enough data

Genome context

ref|NC_046091.1|: 2255628-2255705 [+]

Mature pma-miR-133a-1-3p

• Accession: MIMAT0019460
• Description: Petromyzon marinus pma-miR-133a-1-3p mature miRNA
• Sequence: 50 - UUGGUCCCCUUCAACCAGCUUG - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383