Stem-loop pma-mir-181b-1

Accession

MI0017090

Description

Petromyzon marinus pma-mir-181b-1 precursor miRNA

Sequence

gcaggaucucgcuuGACAUUCAGUGCUGUCGGUGGGUguugcgcgugccugccucgaacacauaacCCAGGGAGCACUGAAUGCACAccgugauccgag
...(((((.((..((.(((((((((((.(((((..(((((..((......))....)))))...)))..)).)))))))))))))...)).)))))...

Structure

gca     u  -cu  A           G  --   -GG     --gc  gu 
   ggauc cg   uG CAUUCAGUGCU UC  GGU   GUguu    gc  g
   ||||| ||   || ||||||||||| ||  |||   |||||    ||   
   ccuag gc   AC GUAAGUCACGA GG  Cca   cacaa    cg  c
gag     u  cAC  -           G  AC   aua     gcuc  uc 

Annotation confidence Not enough data

Genome context

GL477358.1: 3082-3180 [+]

Mature pma-miR-181b-5p

• Accession: MIMAT0019488
• Description: Petromyzon marinus pma-miR-181b-5p mature miRNA
• Sequence: 15 - GACAUUCAGUGCUGUCGGUGGGU - 37
• Evidence: experimental ; 454 [1]

Mature pma-miR-181b-3p

• Accession: MIMAT0019489
• Description: Petromyzon marinus pma-miR-181b-3p mature miRNA
• Sequence: 67 - CCAGGGAGCACUGAAUGCACA - 87
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383