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Identification of apple miRNAs and their potential role in fire blight resistance |
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|---|---|
| PubMed ID | N/A |
| Authors | "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I" |
| Journal | Tree Genet Genomes. |
| Volume | 11 |
| Pages | 812 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| mdm-MIR171f | MI0023047 | None | MDC008930.262 | 37773 | 37874 | - | - |
| mdm-MIR319b | MI0023072 | None | MDC008903.290 | 17094 | 17286 | + | - |
| mdm-MIR395d | MI0023087 | None | MDC003846.250 | 17630 | 17771 | - | - |
| mdm-MIR395g | MI0023090 | None | MDC003846.250 | 11880 | 12031 | + | - |
| mdm-MIR395i | MI0023092 | None | MDC003768.152 | 37677 | 37780 | + | - |
| mdm-MIR7120a | MI0023141 | None | MDC017840.207 | 3632 | 3812 | + | - |
| mdm-MIR7120b | MI0023142 | None | MDC019554.272 | 10041 | 10221 | - | - |
| mdm-MIR319c | MI0023162 | None | MDC009318.175 | 3694 | 3869 | + | - |
| mdm-MIR7126 | MI0023164 | None | MDC014075.204 | 25952 | 26102 | - | - |
| mdm-MIR10978a | MI0035582 | None | MDC018881.361 | 6703 | 6921 | - | - |
| mdm-MIR10978b | MI0035583 | None | MDC018881.351 | 4615 | 4811 | - | - |
| mdm-MIR10979 | MI0035584 | None | MDC008844.651 | 2217 | 2408 | + | - |
| mdm-MIR10980a | MI0035585 | None | MDC009540.166 | 985 | 1136 | + | - |
| mdm-MIR10980b | MI0035586 | None | MDC013179.266 | 5931 | 6101 | + | - |
| mdm-MIR10981a | MI0035587 | None | MDC000839.489 | 2465 | 2692 | + | - |
| mdm-MIR10981b | MI0035588 | None | MDC011018.554 | 14886 | 15104 | + | - |
| mdm-MIR3627d | MI0035589 | None | MDC006958.369 | 10681 | 10770 | + | - |
| mdm-MIR10982a | MI0035590 | None | MDC002288.365 | 6291 | 6371 | - | - |
| mdm-MIR10982b | MI0035591 | None | MDC005755.108 | 323 | 403 | - | - |
| mdm-MIR10982c | MI0035592 | None | MDC006277.190 | 994 | 1074 | + | - |
| mdm-MIR10982d | MI0035593 | None | MDC019118.333 | 2618 | 2698 | + | - |
| mdm-MIR159d | MI0035594 | None | MDC001900.112 | 17252 | 17462 | + | - |
| mdm-MIR159e | MI0035595 | None | MDC011193.361 | 3986 | 4239 | - | - |
| mdm-MIR159f | MI0035596 | None | MDC011193.509 | 3014 | 3247 | - | - |
| mdm-MIR530a | MI0035597 | None | MDC007946.169 | 468 | 724 | - | - |
| mdm-MIR530b | MI0035598 | None | MDC019515.368 | 17290 | 17550 | + | - |
| mdm-MIR530c | MI0035599 | None | MDC016706.224 | 4106 | 4362 | + | - |
| mdm-MIR166j | MI0035600 | None | MDC006517.413 | 15753 | 15874 | + | - |
| mdm-MIR10983 | MI0035601 | None | MDC009740.183 | 2169 | 2336 | + | - |
| mdm-MIR10984a | MI0035602 | None | MDC005862.437 | 7931 | 8201 | - | - |
| mdm-MIR10985 | MI0035603 | None | MDC004996.254 | 1572 | 1654 | - | - |
| mdm-MIR399k | MI0035604 | None | MDC018343.157 | 12734 | 12869 | + | - |
| mdm-MIR10986 | MI0035605 | None | MDC006251.222 | 16890 | 17150 | + | - |
| mdm-MIR319d | MI0035606 | None | MDC016620.357 | 18381 | 18517 | + | - |
| mdm-MIR10987 | MI0035607 | None | MDC016302.308 | 5169 | 5438 | + | - |
| mdm-MIR10988 | MI0035608 | None | MDC019830.64 | 8505 | 8818 | - | - |
| mdm-MIR10989a | MI0035609 | None | MDC012210.295 | 9960 | 10420 | + | - |
| mdm-MIR10989b | MI0035610 | None | MDC018873.313 | 7694 | 8134 | - | - |
| mdm-MIR10989c | MI0035611 | None | MDC018873.313 | 10299 | 10719 | - | - |
| mdm-MIR10989d | MI0035612 | None | MDC018873.313 | 4550 | 4990 | - | - |
| mdm-MIR10989e | MI0035613 | None | MDC018484.243 | 4579 | 5009 | - | - |
| mdm-MIR10990 | MI0035614 | None | MDC009251.399 | 540 | 829 | + | - |
| mdm-MIR10991a | MI0035615 | None | MDC018744.152 | 1811 | 2023 | + | - |
| mdm-MIR10991b | MI0035616 | None | MDC005447.312 | 1469 | 1641 | + | - |
| mdm-MIR10991c | MI0035617 | None | MDC000600.449 | 4580 | 4721 | + | - |
| mdm-MIR10991d | MI0035618 | None | MDC007515.264 | 1896 | 2108 | - | - |
| mdm-MIR10991e | MI0035619 | None | MDC008417.255 | 2027 | 2259 | + | - |
| mdm-MIR10992 | MI0035620 | None | MDC017456.160 | 13529 | 13930 | - | - |
| mdm-MIR319e | MI0035621 | None | MDC002990.685 | 6834 | 7040 | + | - |
| mdm-MIR319f | MI0035622 | None | MDC009430.318 | 14032 | 14238 | - | - |
| mdm-MIR319g | MI0035623 | None | MDC011566.500 | 5042 | 5349 | - | - |
| mdm-MIR10993a | MI0035624 | None | MDC041996.8 | 2864 | 3119 | + | - |
| mdm-MIR10993b | MI0035625 | None | MDC013544.206 | 25032 | 25249 | - | - |
| mdm-MIR10994 | MI0035626 | None | MDC013407.145 | 2590 | 2866 | + | - |
| mdm-MIR395j | MI0035627 | None | MDC003846.250 | 12355 | 12467 | + | - |
| mdm-MIR169g | MI0035628 | None | MDC011517.596 | 5517 | 5828 | + | - |
| mdm-MIR169h | MI0035629 | None | MDC002922.166 | 127 | 458 | - | - |
| mdm-MIR169i | MI0035630 | None | MDC021880.124 | 31614 | 31897 | - | - |
| mdm-MIR169j | MI0035631 | None | MDC017225.184 | 8894 | 9225 | + | - |
| mdm-MIR10995 | MI0035632 | None | MDC011311.340 | 48019 | 48207 | - | - |
| mdm-MIR10996a | MI0035633 | None | MDC010449.276 | 6773 | 6932 | + | - |
| mdm-MIR10997 | MI0035634 | None | MDC018695.28 | 16542 | 16664 | - | - |
| mdm-MIR171p | MI0035635 | None | MDC015454.116 | 3728 | 3873 | + | - |
| mdm-MIR393g | MI0035636 | None | MDC012340.117 | 7899 | 8015 | + | - |
| mdm-MIR393h | MI0035637 | None | MDC012883.431 | 61501 | 61617 | - | - |
| mdm-MIR10998 | MI0035638 | None | MDC022659.316 | 23619 | 23919 | - | - |
| mdm-MIR395k | MI0035639 | None | MDC003846.250 | 8270 | 8437 | - | - |
| mdm-MIR10993c | MI0035640 | None | MDC001264.593 | 854 | 1024 | + | - |
| mdm-MIR10993d | MI0035641 | None | MDC007788.280 | 8491 | 8663 | - | - |
| mdm-MIR10993e | MI0035642 | None | MDC025339.12 | 1445 | 1617 | + | - |
| mdm-MIR10993f | MI0035643 | None | MDC013698.229 | 8957 | 9113 | + | - |
| mdm-MIR10999a | MI0035644 | None | MDC011592.254 | 1365 | 1478 | + | - |
| mdm-MIR10999b | MI0035645 | None | MDC011592.184 | 1253 | 1367 | + | - |
| mdm-MIR10981c | MI0035646 | None | MDC004588.287 | 5215 | 5374 | + | - |
| mdm-MIR10981d | MI0035647 | None | MDC002503.92 | 5954 | 6113 | + | - |
| mdm-MIR319h | MI0035648 | None | MDC004434.326 | 8757 | 8949 | + | - |
| mdm-MIR11002c | MI0035649 | None | MDC010482.578 | 8757 | 9047 | - | - |
| mdm-MIR11000 | MI0035650 | None | MDC004128.271 | 8670 | 8745 | + | - |
| mdm-MIR11001 | MI0035651 | None | MDC008938.426 | 3794 | 4150 | - | - |
| mdm-MIR11002a | MI0035652 | None | MDC020654.421 | 3249 | 3525 | - | - |
| mdm-MIR11002b | MI0035653 | None | MDC020654.438 | 929 | 1205 | - | - |
| mdm-MIR11003 | MI0035654 | None | MDC017203.93 | 41410 | 41598 | + | - |
| mdm-MIR11004 | MI0035655 | None | MDC005752.143 | 30222 | 30370 | - | - |
| mdm-MIR11005 | MI0035656 | None | MDC019212.115 | 11817 | 12131 | + | - |
| mdm-MIR171q | MI0035657 | None | MDC008623.473 | 2694 | 2835 | + | - |
| mdm-MIR11006 | MI0035658 | None | MDC001878.262 | 194 | 268 | - | - |
| mdm-MIR11007 | MI0035659 | None | MDC021658.160 | 16245 | 16441 | - | - |
| mdm-MIR11008 | MI0035660 | None | MDC006630.345 | 26791 | 27023 | + | - |
| mdm-MIR10984b | MI0035661 | None | MDC005862.437 | 7931 | 8199 | + | - |
| mdm-MIR11009 | MI0035662 | None | MDC002608.351 | 2369 | 2484 | - | - |
| mdm-MIR11010 | MI0035663 | None | MDC005296.140 | 6631 | 6700 | - | - |
| mdm-MIR11011a | MI0035664 | None | MDC010208.312 | 29966 | 30285 | - | - |
| mdm-MIR11012a | MI0035665 | None | MDC002388.629 | 2376 | 2696 | + | - |
| mdm-MIR11012b | MI0035666 | None | MDC004277.282 | 1174 | 1494 | - | - |
| mdm-MIR169k | MI0035667 | None | MDC002619.349 | 91031 | 91292 | + | - |
| mdm-MIR169l | MI0035668 | None | MDC011475.284 | 254 | 543 | + | - |
| mdm-MIR169m | MI0035669 | None | MDC013245.290 | 4504 | 4700 | + | - |
| mdm-MIR169n | MI0035670 | None | MDC003479.331 | 24710 | 24974 | - | - |
| mdm-MIR172p | MI0035671 | None | MDC020608.143 | 3762 | 3877 | - | - |
| mdm-MIR11013 | MI0035672 | None | MDC021610.17 | 9505 | 9815 | - | - |
| mdm-MIR10996b | MI0035673 | None | MDC001018.298 | 1432 | 1587 | - | - |
| mdm-MIR11014 | MI0035674 | None | MDC002823.250 | 2985 | 3091 | - | - |
| mdm-MIR11015 | MI0035675 | None | MDC006414.458 | 15258 | 15359 | + | - |
| mdm-MIR11016 | MI0035676 | None | MDC005072.383 | 9803 | 9935 | + | - |
| mdm-MIR395l | MI0035677 | None | MDC003768.152 | 35976 | 36111 | - | - |
| mdm-MIR11017 | MI0035678 | None | MDC005641.309 | 1113 | 1313 | + | - |
| mdm-MIR11018 | MI0035679 | None | MDC005320.543 | 4415 | 4599 | + | - |
| mdm-MIR11019 | MI0035680 | None | MDC020582.252 | 12264 | 12566 | + | - |
| mdm-MIR11011b | MI0035681 | None | MDC018209.167 | 21973 | 22296 | - | - |
| mdm-MIR11020 | MI0035682 | None | MDC019030.88 | 1508 | 1617 | + | - |
| mdm-MIR169o | MI0035683 | None | MDC015971.68 | 4397 | 4610 | + | - |