miRBase entry: mdm-MIR10982b

Stem-loop mdm-MIR10982b


Accession
MI0035591
Description
Malus domestica mdm-MIR10982b precursor miRNA


Sequence

10773 reads, 899.0 reads per million, 26 experiments
aUGAGGCGGGAAUUCAUCGUAAGuuucaauugaaugaacuugaggaaauaCGGAAUGAAGCUUACGAGAAUGcucgacuuu
..((((((((.((((.((((((((((((.((.....................)).)))))))))))))))).)))).))))

Structure
aU    -    A    A            a  gaaugaacu 
  GAGG CGGG AUUC UCGUAAGuuuca uu         u
  |||| |||| |||| |||||||||||| ||         g
  uuuc gcuc UAAG AGCAUUCGAAGU AG         a
--    a    G    -            A  GCauaaagg 


Annotation confidence Medium
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Genome context
MDC005755.108: 323-403 [-]

Database links

Mature mdm-miR10982b-5p

Accession MIMAT0056745
Description Malus domestica mdm-miR10982b-5p mature miRNA
Sequence 2 - UGAGGCGGGAAUUCAUCGUAAG - 23
Evidence experimental
unknown

Mature mdm-miR10982b-3p

Accession MIMAT0043536
Description Malus domestica mdm-miR10982b-3p mature miRNA
Sequence 51 - CGGAAUGAAGCUUACGAGAAUG - 72
Evidence experimental
Illumina [1]

References

  1. Identification of apple miRNAs and their potential role in fire blight resistance
    "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
    Tree Genet Genomes. (2014) 11:812