Accession
MI0035667
Description
Malus domestica
mdm-MIR169k precursor miRNA
Literature search
4 open access papers mention mdm-MIR169k
(9 sentences)
(9 sentences)
Sequence
2030
reads,
1570.0
reads per million, 32 experiments
aucaaaaggaaaaggaaauauugaagagaguguauaacaugaagagaagaguguuguuuggUAGCCAAGGAUGACUUGCCUGcugugcugccgcgcgcuccuaauuccaauccaauccacgagguggcaguacguaaguacucacucuccuacguguuguuggguucuccgcagcagccaccaggcagucuccuuuggcuaacuugacarccucuucuucucaugcuauacccuucUCUUCUUCUUCUUCUUCUUCUUCuuc
.....(((((.(((((......((((((((.(((((.(((((.((((((((.(.((((.(((((((((((..((((.(((((.((.(((((.(((.............((((((((.(((((((.((.(((((....)))))...)).))).))))..))))))))...))).))))))).)))))))))..)))))))).))).)))).))))))))).))))).))))).).)))))))......))))).)))))....
.....(((((.(((((......((((((((.(((((.(((((.((((((((.(.((((.(((((((((((..((((.(((((.((.(((((.(((.............((((((((.(((((((.((.(((((....)))))...)).))).))))..))))))))...))).))))))).)))))))))..)))))))).))).)))).))))))))).))))).))))).).)))))))......))))).)))))....
Structure
aucaa a aauauu - u a a u u u - AU U c u c cgcuccuaauucc -c - u --c g
aagga aagga gaagaga g guaua cauga gagaagag g uguu ggU AGCCAAGG GACU GCCUG ug gcugc gcg aauccaau cacg agg gg aguac u
||||| ||||| ||||||| | ||||| ||||| |||||||| | |||| ||| |||||||| |||| ||||| || ||||| ||| |||||||| |||| ||| || |||||
UUCUU UUCUU CUUCUcu c cauau guacu uucuucuc c acag uca ucgguuuc cuga cggac ac cgacg cgc uuggguug gugc ucc cu ucaug a
-cuuC C CUUCUU u c c c - r u a cu - c - a ----------cuc uu a u cac a
Annotation confidence
Low
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Genome context
MDC002619.349: 91031-91292 [+]
Database links
Mature mdm-miR169k-5p
| Accession | MIMAT0043616 |
| Description | Malus domestica mdm-miR169k-5p mature miRNA |
| Sequence | 62 - UAGCCAAGGAUGACUUGCCUG - 82 |
| Evidence |
experimental
Illumina [1] |
Mature mdm-miR169k-3p
| Accession | MIMAT0056810 |
| Description | Malus domestica mdm-miR169k-3p mature miRNA |
| Sequence | 237 - UCUUCUUCUUCUUCUUCUUCUUC - 259 |
| Evidence |
experimental
unknown |
References
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